Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902212.1_cds_XP_016452219.1_46482
CDS Infomation

[gene=LOC107776806] [db_xref=GeneID:107776806] [protein=testis-expressed sequence 2 protein-like isoform X3] [protein_id=XP_016452219.1] [location=join(127937..128085,128563..129232,129470..129833,130086..130189,130824..131018,131957..132661)] [gbkey=CDS]
Sequence

ATGTTAGAGGTAATACCGGCTCGGAAATTTGGTAAAATCAAGGATCACTCTCTCATTCTA
ACGGATTCAGATGGTTCCCGTACTGAAATTCCACTCAAAGGTTGCATGGTTTCCGCTGTT
TCTGCTTCAAGCTTGTCCTCTAGAAAATGGGCAAAAAAATACCCTATTAAAATTGAGAAC
GGAGCATCTGCTATATATAAAGGAAGTGGTATATTTTACATTTACCTTGAGACGTCTTGG
GAGAAGGAATCATGGTGCAAAGCCCTTCGTCTTGCTTCTTGCGAGGATGAAGAAAAACTA
AAGTGGTTGGCGAGGTTAAACTTAGAGTTCCGGAATTATCTGACAAGACTAAATGCAGGA
TATCCTTCATTTATGAAACCATCTTCTAGTTTTGGTGCTGAATTAGTTGATAAATCGAGC
AAGCCTGATAGTTCCTCGTCAAAAGTTCGTCAATTTCTGAAAAAAATTGCCAAAAAAACT
ACCAAGAATGCTCCTGAAAATAAGGCAAGCTGCAGTTCAAAATCAGGTTATGACGAACGT
AAGATGAGTGAGAAAACTCATTTGTTCCAAGATCTTGACTTGGCCAGTGGTGTTATGAAG
GTTGCTTCAACAAGAAAGCCTCTTGATTTTTGCAATGAGGATGTTACAGCGCCTTCGTCC
ATTGTATCCTCTACTTGCTCTGTCATTTCTGATGCAGACTCTGATGACAGGGTTTTTTGT
GATGAAGGATCCCTTTGTTGGAATTTGTTAATATCACGGTTGTTCTTTGATGCTAAAAGA
AATGAGCAGATGAAAAGTTCTTTGCAAGAACGGATTCAGAGAACGCTCTCCAATATCCGT
AGCCCCAGTTACATAGGTGAAGTAACCTGCGCAGCTGTTGATGTTGGTAACCTCCCTCCC
TATATACATGCAATGAGGGTTCTTCCCTCAGACATGAACGAGGTCTGGGCTTTTGAAATT
GATGTTCAGTACTCTGGTGGTGCAATATTGGATCTTGAGACAAGGCTTGAAGTTCAGGAC
CTTGATTTACATGAAGGGGACGATGCAAGTGTAGATTCTAGTGCTGTTGATGATGTCAAA
TCACACTTGTTAGAAGGTTTTGAGGACTTTGATGAACAATTTATGCACTCGGACGACCAC
GTGGATAAGATGGACCAAAGAGATAGAGGTGATACACCAGCACGTGTTTCAAACGCGAGT
AGAAGCTCTAATGGCATACCTAGTGGCTCACCTCCTGGATCAAAGTGGAAATCAATTTTA
CATTCTGTGGCCAAGCAGGTTTCACAGGTTCCACTCTCTCTGGGGATTAGGGTTGCATCT
CTACGAGGAACATTGAGGTTGTATGTAAAGCCACCACCTTCAGATCAGATATGGTTTGGA
TTCACATCGATGCCAGATATTGACATCCATTTGAACTCTTCTGTTGGGGATCGTAAGATA
TCAAGTGGACACCTTTCTTTGTTCCTAATCAGTCGAATTAAGGCTGCTATCCGTGAAACT
GTCGTACTTCCACACTGTGAGAATGTATGCATCCCTTGGATGATAGCAGAAAAGGATGAC
TGGGTTCCCGTAAAAGATGCTCCATATATATGGATTAATAACAAATCTGCAGGTAATGCC
AACAAACCAGAAGCGCGGATCTCCCATCCTGGGGACACAACACAAGTAGCTGAAGCAGAT
AGGAGAAGTGATGCTGAAAGAGGACTTAACGGAGGTGGATGGGCTAGTAAAAAAAGCAAG
TCACTGGATCCCCACATATTCTGTTCAGTTCCTAGGGGTAAGCCTAGTTTCAATAGCAGA
AGCCTCACTAGCAGTCCAGAAAGAAAGCACGTAAATCCCAAAAAACTTCACGGAGATGCA
CAACAAGGCAGGTTGTCCGATCCACAGTCATATTTATCAGTTCATAAGAGCCAATCTTCA
TCAGATTTTCATGTCCCCTTGCTGAAGCACGATGAAGAACAGAGAGAGACTCATCGCATG
AGCTCAGAGAGCATGTCACCTTCTCATCTAGAAGAACACAATCATTTTACAGAAGATGAT
ATGAAACCAAAAAGAACAGGGACAAGGGCTAGGATGCATGGTTTGCGGAAAAAAATGGGG
GAAAAACTTGAAGAGAAGAAGCGTCACATAGAAGAGAAGGGGAGACACTTAGTGGAAAGG
ATGAGAAGCCACAAGGAATATTCCTAA

Peptide Sequence

PEP ID

XP_016452219.1
PEP Infomation

PREDICTED: testis-expressed sequence 2 protein-like isoform X3 [Nicotiana tabacum]
Sequence

MLEVIPARKFGKIKDHSLILTDSDGSRTEIPLKGCMVSAVSASSLSSRKWAKKYPIKIEN
GASAIYKGSGIFYIYLETSWEKESWCKALRLASCEDEEKLKWLARLNLEFRNYLTRLNAG
YPSFMKPSSSFGAELVDKSSKPDSSSSKVRQFLKKIAKKTTKNAPENKASCSSKSGYDER
KMSEKTHLFQDLDLASGVMKVASTRKPLDFCNEDVTAPSSIVSSTCSVISDADSDDRVFC
DEGSLCWNLLISRLFFDAKRNEQMKSSLQERIQRTLSNIRSPSYIGEVTCAAVDVGNLPP
YIHAMRVLPSDMNEVWAFEIDVQYSGGAILDLETRLEVQDLDLHEGDDASVDSSAVDDVK
SHLLEGFEDFDEQFMHSDDHVDKMDQRDRGDTPARVSNASRSSNGIPSGSPPGSKWKSIL
HSVAKQVSQVPLSLGIRVASLRGTLRLYVKPPPSDQIWFGFTSMPDIDIHLNSSVGDRKI
SSGHLSLFLISRIKAAIRETVVLPHCENVCIPWMIAEKDDWVPVKDAPYIWINNKSAGNA
NKPEARISHPGDTTQVAEADRRSDAERGLNGGGWASKKSKSLDPHIFCSVPRGKPSFNSR
SLTSSPERKHVNPKKLHGDAQQGRLSDPQSYLSVHKSQSSSDFHVPLLKHDEEQRETHRM
SSESMSPSHLEEHNHFTEDDMKPKRTGTRARMHGLRKKMGEKLEEKKRHIEEKGRHLVER
MRSHKEYS

Transcript Sequence

Gene sequence data has not been registered.